De Novo mutation Discovery – detection of de novo mutations in sequencing data from families (program initially developed by Dr J.E.M. Keebler) For details see Cartwright R. et al. 2012. J Stat Appl Genet Mol Biol. Vol. 11 Iss. 2:6. [pdf]

NucFamTools – package to infer location of recombination events in genetic data from families. For details see Hussin J. et al. 2011. PLoS Genetics 7(9): e1002251 [pdf]

SvdTOOLS – package to detect signatures of selection from genotyping data. For details see Hussin J. et al. 2010. BMC Bioinformatics 11:65 [pdf]